Usage: python [CohortInteg code name] [input folder] [output folder] [qva]
0.1
Step 1 : Process maf files:
	- Output folder: /lab/cedar/home/hgovinda/Cohort-Integration/CohortIntegration/Data/20230602_150102/output/Processed_MAF/
		-BRCA_EA.maf
Step 2 : Generate ANNOVAR files: