load /Users/dmkonecki/Documents/WorkStationSync/Results/Covid19/Final_Run/DataSets_09142020_full/Shared/PDBs/6xez.pdb, 6xez_Normalized_Unique_Var_Count
select target_chain, 6xez_Normalized_Unique_Var_Count and chain C
color white, 6xez_Normalized_Unique_Var_Count
delete target_chain
select curr_residues, 6xez_Normalized_Unique_Var_Count and chain C and resi 2+3+26+30+33+40+45+52+56+68+71+72
color 0x76FF00, curr_residues
delete curr_residues
select curr_residues, 6xez_Normalized_Unique_Var_Count and chain C and resi 6+7+9+10+12+13+14+15+16+17+18+20+21+22+25+31+32+34+39+42+46+47+48+49+50+54+55+60+65+66+67+69+70+73
color 0x00D4FF, curr_residues
delete curr_residues
select curr_residues, 6xez_Normalized_Unique_Var_Count and chain C and resi 58+62
color 0xFF0000, curr_residues
delete curr_residues
save /media/daniel/ExtraDrive1/Results/Covid19/Final_Run/coronavirus/COV2_ORF1ab_breakdown/nsp7/structure/6xez_Normalized_Unique_Var_Count.pse, 6xez_Normalized_Unique_Var_Count, -1, pse
load /Users/dmkonecki/Documents/WorkStationSync/Results/Covid19/Final_Run/DataSets_09142020_full/Shared/PDBs/6xez.pdb, 6xez_Normalized_Var_Count
select target_chain, 6xez_Normalized_Var_Count and chain C
color white, 6xez_Normalized_Var_Count
delete target_chain
select curr_residues, 6xez_Normalized_Var_Count and chain C and resi 3+15+26+30+31+50+56+58+62+70
color 0xB300FF, curr_residues
delete curr_residues
select curr_residues, 6xez_Normalized_Var_Count and chain C and resi 25
color 0xFF0000, curr_residues
delete curr_residues
select curr_residues, 6xez_Normalized_Var_Count and chain C and resi 71
color 0x7600FF, curr_residues
delete curr_residues
save /media/daniel/ExtraDrive1/Results/Covid19/Final_Run/coronavirus/COV2_ORF1ab_breakdown/nsp7/structure/6xez_Normalized_Var_Count.pse, 6xez_Normalized_Var_Count, -1, pse
load /Users/dmkonecki/Documents/WorkStationSync/Results/Covid19/Final_Run/DataSets_09142020_full/Shared/PDBs/6xez.pdb, 6xez_Normalized_Highest_Freq_Var_Count
select target_chain, 6xez_Normalized_Highest_Freq_Var_Count and chain C
color white, 6xez_Normalized_Highest_Freq_Var_Count
delete target_chain
select curr_residues, 6xez_Normalized_Highest_Freq_Var_Count and chain C and resi 3+15+26+30+31+50+56+70
color 0xB300FF, curr_residues
delete curr_residues
select curr_residues, 6xez_Normalized_Highest_Freq_Var_Count and chain C and resi 25
color 0xFF0000, curr_residues
delete curr_residues
select curr_residues, 6xez_Normalized_Highest_Freq_Var_Count and chain C and resi 71
color 0x7600FF, curr_residues
delete curr_residues
save /media/daniel/ExtraDrive1/Results/Covid19/Final_Run/coronavirus/COV2_ORF1ab_breakdown/nsp7/structure/6xez_Normalized_Highest_Freq_Var_Count.pse, 6xez_Normalized_Highest_Freq_Var_Count, -1, pse
load /Users/dmkonecki/Documents/WorkStationSync/Results/Covid19/Final_Run/DataSets_09142020_full/Shared/PDBs/6xez.pdb, 6xez_Inverse_ET
select target_chain, 6xez_Inverse_ET and chain C
color white, 6xez_Inverse_ET
delete target_chain
select curr_residues, 6xez_Inverse_ET and chain C and resi 1
color 0xFFE800, curr_residues
delete curr_residues
select curr_residues, 6xez_Inverse_ET and chain C and resi 2
color 0x00FF41, curr_residues
delete curr_residues
select curr_residues, 6xez_Inverse_ET and chain C and resi 3
color 0xD8FF00, curr_residues
delete curr_residues
select curr_residues, 6xez_Inverse_ET and chain C and resi 4
color 0x00FF66, curr_residues
delete curr_residues
select curr_residues, 6xez_Inverse_ET and chain C and resi 5
color 0x9BFF00, curr_residues
delete curr_residues
select curr_residues, 6xez_Inverse_ET and chain C and resi 6
color 0x0800FF, curr_residues
delete curr_residues
select curr_residues, 6xez_Inverse_ET and chain C and resi 7
color 0xFFD000, curr_residues
delete curr_residues
select curr_residues, 6xez_Inverse_ET and chain C and resi 8
color 0xFFDC00, curr_residues
delete curr_residues
select curr_residues, 6xez_Inverse_ET and chain C and resi 9
color 0x00ECFF, curr_residues
delete curr_residues
select curr_residues, 6xez_Inverse_ET and chain C and resi 10
color 0xB3FF00, curr_residues
delete curr_residues
select curr_residues, 6xez_Inverse_ET and chain C and resi 11
color 0xFF4900, curr_residues
delete curr_residues
select curr_residues, 6xez_Inverse_ET and chain C and resi 12
color 0xFF3D00, curr_residues
delete curr_residues
select curr_residues, 6xez_Inverse_ET and chain C and resi 13
color 0xFF3000, curr_residues
delete curr_residues
select curr_residues, 6xez_Inverse_ET and chain C and resi 14
color 0xBFFF00, curr_residues
delete curr_residues
select curr_residues, 6xez_Inverse_ET and chain C and resi 15
color 0x45FF00, curr_residues
delete curr_residues
select curr_residues, 6xez_Inverse_ET and chain C and resi 16
color 0x20FF00, curr_residues
delete curr_residues
select curr_residues, 6xez_Inverse_ET and chain C and resi 17+36+37
color 0xFF2400, curr_residues
delete curr_residues
select curr_residues, 6xez_Inverse_ET and chain C and resi 18
color 0x00FF10, curr_residues
delete curr_residues
select curr_residues, 6xez_Inverse_ET and chain C and resi 19
color 0x00FFBB, curr_residues
delete curr_residues
select curr_residues, 6xez_Inverse_ET and chain C and resi 20
color 0xFF9200, curr_residues
delete curr_residues
select curr_residues, 6xez_Inverse_ET and chain C and resi 21
color 0x6AFF00, curr_residues
delete curr_residues
select curr_residues, 6xez_Inverse_ET and chain C and resi 22
color 0x0010FF, curr_residues
delete curr_residues
select curr_residues, 6xez_Inverse_ET and chain C and resi 23
color 0x00E0FF, curr_residues
delete curr_residues
select curr_residues, 6xez_Inverse_ET and chain C and resi 24
color 0x0096FF, curr_residues
delete curr_residues
select curr_residues, 6xez_Inverse_ET and chain C and resi 25
color 0x8EFF00, curr_residues
delete curr_residues
select curr_residues, 6xez_Inverse_ET and chain C and resi 26
color 0xF0FF00, curr_residues
delete curr_residues
select curr_residues, 6xez_Inverse_ET and chain C and resi 27
color 0x0072FF, curr_residues
delete curr_residues
select curr_residues, 6xez_Inverse_ET and chain C and resi 28
color 0x00FF35, curr_residues
delete curr_residues
select curr_residues, 6xez_Inverse_ET and chain C and resi 29
color 0xFF7A00, curr_residues
delete curr_residues
select curr_residues, 6xez_Inverse_ET and chain C and resi 30
color 0x0035FF, curr_residues
delete curr_residues
select curr_residues, 6xez_Inverse_ET and chain C and resi 31
color 0x00FFF8, curr_residues
delete curr_residues
select curr_residues, 6xez_Inverse_ET and chain C and resi 32
color 0xFF8600, curr_residues
delete curr_residues
select curr_residues, 6xez_Inverse_ET and chain C and resi 33
color 0xFF6E00, curr_residues
delete curr_residues
select curr_residues, 6xez_Inverse_ET and chain C and resi 34
color 0x7600FF, curr_residues
delete curr_residues
select curr_residues, 6xez_Inverse_ET and chain C and resi 35
color 0x00FF4D, curr_residues
delete curr_residues
select curr_residues, 6xez_Inverse_ET and chain C and resi 38
color 0x00FFAF, curr_residues
delete curr_residues
select curr_residues, 6xez_Inverse_ET and chain C and resi 39
color 0xFF5500, curr_residues
delete curr_residues
select curr_residues, 6xez_Inverse_ET and chain C and resi 40
color 0xFFB700, curr_residues
delete curr_residues
select curr_residues, 6xez_Inverse_ET and chain C and resi 41
color 0x00FF96, curr_residues
delete curr_residues
select curr_residues, 6xez_Inverse_ET and chain C and resi 42
color 0x00BBFF, curr_residues
delete curr_residues
select curr_residues, 6xez_Inverse_ET and chain C and resi 43
color 0x5D00FF, curr_residues
delete curr_residues
select curr_residues, 6xez_Inverse_ET and chain C and resi 44
color 0xFCFF00, curr_residues
delete curr_residues
select curr_residues, 6xez_Inverse_ET and chain C and resi 45
color 0x0066FF, curr_residues
delete curr_residues
select curr_residues, 6xez_Inverse_ET and chain C and resi 46
color 0x8200FF, curr_residues
delete curr_residues
select curr_residues, 6xez_Inverse_ET and chain C and resi 47
color 0xA700FF, curr_residues
delete curr_residues
select curr_residues, 6xez_Inverse_ET and chain C and resi 48
color 0xE4FF00, curr_residues
delete curr_residues
select curr_residues, 6xez_Inverse_ET and chain C and resi 49
color 0x00FF1C, curr_residues
delete curr_residues
select curr_residues, 6xez_Inverse_ET and chain C and resi 50
color 0x0096FF, curr_residues
delete curr_residues
select curr_residues, 6xez_Inverse_ET and chain C and resi 51
color 0x001CFF, curr_residues
delete curr_residues
select curr_residues, 6xez_Inverse_ET and chain C and resi 52
color 0x5DFF00, curr_residues
delete curr_residues
select curr_residues, 6xez_Inverse_ET and chain C and resi 53
color 0x51FF00, curr_residues
delete curr_residues
select curr_residues, 6xez_Inverse_ET and chain C and resi 54
color 0x00FF8A, curr_residues
delete curr_residues
select curr_residues, 6xez_Inverse_ET and chain C and resi 55
color 0xFFAB00, curr_residues
delete curr_residues
select curr_residues, 6xez_Inverse_ET and chain C and resi 56
color 0x00FF7E, curr_residues
delete curr_residues
select curr_residues, 6xez_Inverse_ET and chain C and resi 57
color 0x0059FF, curr_residues
delete curr_residues
select curr_residues, 6xez_Inverse_ET and chain C and resi 58
color 0xA7FF00, curr_residues
delete curr_residues
select curr_residues, 6xez_Inverse_ET and chain C and resi 59
color 0xFFC300, curr_residues
delete curr_residues
select curr_residues, 6xez_Inverse_ET and chain C and resi 60
color 0x00FF28, curr_residues
delete curr_residues
select curr_residues, 6xez_Inverse_ET and chain C and resi 61
color 0x00FF72, curr_residues
delete curr_residues
select curr_residues, 6xez_Inverse_ET and chain C and resi 62
color 0x00C7FF, curr_residues
delete curr_residues
select curr_residues, 6xez_Inverse_ET and chain C and resi 63
color 0x00FFC7, curr_residues
delete curr_residues
select curr_residues, 6xez_Inverse_ET and chain C and resi 64
color 0x00F8FF, curr_residues
delete curr_residues
select curr_residues, 6xez_Inverse_ET and chain C and resi 65
color 0x00AFFF, curr_residues
delete curr_residues
select curr_residues, 6xez_Inverse_ET and chain C and resi 66
color 0x00FFD4, curr_residues
delete curr_residues
select curr_residues, 6xez_Inverse_ET and chain C and resi 67
color 0x14FF00, curr_residues
delete curr_residues
select curr_residues, 6xez_Inverse_ET and chain C and resi 68
color 0x0004FF, curr_residues
delete curr_residues
select curr_residues, 6xez_Inverse_ET and chain C and resi 69
color 0x6A00FF, curr_residues
delete curr_residues
select curr_residues, 6xez_Inverse_ET and chain C and resi 70
color 0x8E00FF, curr_residues
delete curr_residues
select curr_residues, 6xez_Inverse_ET and chain C and resi 71
color 0x2CFF00, curr_residues
delete curr_residues
select curr_residues, 6xez_Inverse_ET and chain C and resi 72
color 0x004DFF, curr_residues
delete curr_residues
select curr_residues, 6xez_Inverse_ET and chain C and resi 73
color 0x4500FF, curr_residues
delete curr_residues
save /media/daniel/ExtraDrive1/Results/Covid19/Final_Run/coronavirus/COV2_ORF1ab_breakdown/nsp7/structure/6xez_Inverse_ET.pse, 6xez_Inverse_ET, -1, pse
load /Users/dmkonecki/Documents/WorkStationSync/Results/Covid19/Final_Run/DataSets_09142020_full/Shared/PDBs/6xez.pdb, 6xez_Rescaled_EA_Highest_Freq
select target_chain, 6xez_Rescaled_EA_Highest_Freq and chain C
color white, 6xez_Rescaled_EA_Highest_Freq
delete target_chain
select curr_residues, 6xez_Rescaled_EA_Highest_Freq and chain C and resi 2
color 0x0028FF, curr_residues
delete curr_residues
select curr_residues, 6xez_Rescaled_EA_Highest_Freq and chain C and resi 3
color 0x00FF4D, curr_residues
delete curr_residues
select curr_residues, 6xez_Rescaled_EA_Highest_Freq and chain C and resi 6
color 0x9B00FF, curr_residues
delete curr_residues
select curr_residues, 6xez_Rescaled_EA_Highest_Freq and chain C and resi 7
color 0x00FF41, curr_residues
delete curr_residues
select curr_residues, 6xez_Rescaled_EA_Highest_Freq and chain C and resi 9
color 0x00E0FF, curr_residues
delete curr_residues
select curr_residues, 6xez_Rescaled_EA_Highest_Freq and chain C and resi 10
color 0xFFE800, curr_residues
delete curr_residues
select curr_residues, 6xez_Rescaled_EA_Highest_Freq and chain C and resi 12
color 0xFFAB00, curr_residues
delete curr_residues
select curr_residues, 6xez_Rescaled_EA_Highest_Freq and chain C and resi 13
color 0xFF1800, curr_residues
delete curr_residues
select curr_residues, 6xez_Rescaled_EA_Highest_Freq and chain C and resi 14
color 0x00FFC7, curr_residues
delete curr_residues
select curr_residues, 6xez_Rescaled_EA_Highest_Freq and chain C and resi 15
color 0x00BBFF, curr_residues
delete curr_residues
select curr_residues, 6xez_Rescaled_EA_Highest_Freq and chain C and resi 16
color 0x00FF7E, curr_residues
delete curr_residues
select curr_residues, 6xez_Rescaled_EA_Highest_Freq and chain C and resi 17
color 0x8EFF00, curr_residues
delete curr_residues
select curr_residues, 6xez_Rescaled_EA_Highest_Freq and chain C and resi 18
color 0x00FF10, curr_residues
delete curr_residues
select curr_residues, 6xez_Rescaled_EA_Highest_Freq and chain C and resi 20
color 0x00FF28, curr_residues
delete curr_residues
select curr_residues, 6xez_Rescaled_EA_Highest_Freq and chain C and resi 21
color 0xA7FF00, curr_residues
delete curr_residues
select curr_residues, 6xez_Rescaled_EA_Highest_Freq and chain C and resi 22
color 0x5100FF, curr_residues
delete curr_residues
select curr_residues, 6xez_Rescaled_EA_Highest_Freq and chain C and resi 25
color 0xE4FF00, curr_residues
delete curr_residues
select curr_residues, 6xez_Rescaled_EA_Highest_Freq and chain C and resi 26
color 0xFCFF00, curr_residues
delete curr_residues
select curr_residues, 6xez_Rescaled_EA_Highest_Freq and chain C and resi 30
color 0x0004FF, curr_residues
delete curr_residues
select curr_residues, 6xez_Rescaled_EA_Highest_Freq and chain C and resi 31
color 0x0800FF, curr_residues
delete curr_residues
select curr_residues, 6xez_Rescaled_EA_Highest_Freq and chain C and resi 32
color 0xFFE800, curr_residues
delete curr_residues
select curr_residues, 6xez_Rescaled_EA_Highest_Freq and chain C and resi 33
color 0x9BFF00, curr_residues
delete curr_residues
select curr_residues, 6xez_Rescaled_EA_Highest_Freq and chain C and resi 34
color 0xA700FF, curr_residues
delete curr_residues
select curr_residues, 6xez_Rescaled_EA_Highest_Freq and chain C and resi 39
color 0x00FF72, curr_residues
delete curr_residues
select curr_residues, 6xez_Rescaled_EA_Highest_Freq and chain C and resi 40
color 0x00FF8A, curr_residues
delete curr_residues
select curr_residues, 6xez_Rescaled_EA_Highest_Freq and chain C and resi 42
color 0x2C00FF, curr_residues
delete curr_residues
select curr_residues, 6xez_Rescaled_EA_Highest_Freq and chain C and resi 45
color 0x0059FF, curr_residues
delete curr_residues
select curr_residues, 6xez_Rescaled_EA_Highest_Freq and chain C and resi 46
color 0x7600FF, curr_residues
delete curr_residues
select curr_residues, 6xez_Rescaled_EA_Highest_Freq and chain C and resi 47
color 0xBF00FF, curr_residues
delete curr_residues
select curr_residues, 6xez_Rescaled_EA_Highest_Freq and chain C and resi 48
color 0x00FFBB, curr_residues
delete curr_residues
select curr_residues, 6xez_Rescaled_EA_Highest_Freq and chain C and resi 49
color 0x00FFEC, curr_residues
delete curr_residues
select curr_residues, 6xez_Rescaled_EA_Highest_Freq and chain C and resi 50
color 0x00FFE0, curr_residues
delete curr_residues
select curr_residues, 6xez_Rescaled_EA_Highest_Freq and chain C and resi 52
color 0x00FF4D, curr_residues
delete curr_residues
select curr_residues, 6xez_Rescaled_EA_Highest_Freq and chain C and resi 54
color 0x00C7FF, curr_residues
delete curr_residues
select curr_residues, 6xez_Rescaled_EA_Highest_Freq and chain C and resi 55
color 0x00FF10, curr_residues
delete curr_residues
select curr_residues, 6xez_Rescaled_EA_Highest_Freq and chain C and resi 56
color 0x008AFF, curr_residues
delete curr_residues
select curr_residues, 6xez_Rescaled_EA_Highest_Freq and chain C and resi 58
color 0xFFAB00, curr_residues
delete curr_residues
select curr_residues, 6xez_Rescaled_EA_Highest_Freq and chain C and resi 60
color 0x007EFF, curr_residues
delete curr_residues
select curr_residues, 6xez_Rescaled_EA_Highest_Freq and chain C and resi 62
color 0x2000FF, curr_residues
delete curr_residues
select curr_residues, 6xez_Rescaled_EA_Highest_Freq and chain C and resi 65
color 0x001CFF, curr_residues
delete curr_residues
select curr_residues, 6xez_Rescaled_EA_Highest_Freq and chain C and resi 66
color 0x6A00FF, curr_residues
delete curr_residues
select curr_residues, 6xez_Rescaled_EA_Highest_Freq and chain C and resi 67
color 0x00FFA3, curr_residues
delete curr_residues
select curr_residues, 6xez_Rescaled_EA_Highest_Freq and chain C and resi 68
color 0x00A3FF, curr_residues
delete curr_residues
select curr_residues, 6xez_Rescaled_EA_Highest_Freq and chain C and resi 69
color 0xA700FF, curr_residues
delete curr_residues
select curr_residues, 6xez_Rescaled_EA_Highest_Freq and chain C and resi 70
color 0xB300FF, curr_residues
delete curr_residues
select curr_residues, 6xez_Rescaled_EA_Highest_Freq and chain C and resi 71
color 0x00FFC7, curr_residues
delete curr_residues
select curr_residues, 6xez_Rescaled_EA_Highest_Freq and chain C and resi 72
color 0x00AFFF, curr_residues
delete curr_residues
select curr_residues, 6xez_Rescaled_EA_Highest_Freq and chain C and resi 73
color 0xB300FF, curr_residues
delete curr_residues
save /media/daniel/ExtraDrive1/Results/Covid19/Final_Run/coronavirus/COV2_ORF1ab_breakdown/nsp7/structure/6xez_Rescaled_EA_Highest_Freq.pse, 6xez_Rescaled_EA_Highest_Freq, -1, pse
load /Users/dmkonecki/Documents/WorkStationSync/Results/Covid19/Final_Run/DataSets_09142020_full/Shared/PDBs/6xez.pdb, 6xez_Normalized_Atom_SA
select target_chain, 6xez_Normalized_Atom_SA and chain C
color white, 6xez_Normalized_Atom_SA
delete target_chain
select curr_residues, 6xez_Normalized_Atom_SA and chain C and resi 1+44
color 0xE4FF00, curr_residues
delete curr_residues
select curr_residues, 6xez_Normalized_Atom_SA and chain C and resi 1+25+31+54+71
color 0x0041FF, curr_residues
delete curr_residues
select curr_residues, 6xez_Normalized_Atom_SA and chain C and resi 1+13+14+20+21+22+23+24+36+42+52+65+67+69+72
color 0x9B00FF, curr_residues
delete curr_residues
select curr_residues, 6xez_Normalized_Atom_SA and chain C and resi 1+2+18+24+44+69+73
color 0x4500FF, curr_residues
delete curr_residues
select curr_residues, 6xez_Normalized_Atom_SA and chain C and resi 1+19+64
color 0x00FF28, curr_residues
delete curr_residues
select curr_residues, 6xez_Normalized_Atom_SA and chain C and resi 1+28
color 0x00FF35, curr_residues
delete curr_residues
select curr_residues, 6xez_Normalized_Atom_SA and chain C and resi 2+11+45+63
color 0x00FF96, curr_residues
delete curr_residues
select curr_residues, 6xez_Normalized_Atom_SA and chain C and resi 2+23+49+56+63+68
color 0x008AFF, curr_residues
delete curr_residues
select curr_residues, 6xez_Normalized_Atom_SA and chain C and resi 2+44+50
color 0x0800FF, curr_residues
delete curr_residues
select curr_residues, 6xez_Normalized_Atom_SA and chain C and resi 2+16+25+61
color 0x5DFF00, curr_residues
delete curr_residues
select curr_residues, 6xez_Normalized_Atom_SA and chain C and resi 2+21+33+68
color 0x00FFE0, curr_residues
delete curr_residues
select curr_residues, 6xez_Normalized_Atom_SA and chain C and resi 3+5+7+27+37+57
color 0x3900FF, curr_residues
delete curr_residues
select curr_residues, 6xez_Normalized_Atom_SA and chain C and resi 3+27+33+38+46
color 0x00FFD4, curr_residues
delete curr_residues
select curr_residues, 6xez_Normalized_Atom_SA and chain C and resi 3+43+47+72
color 0x00D4FF, curr_residues
delete curr_residues
select curr_residues, 6xez_Normalized_Atom_SA and chain C and resi 3+4+6+7+9+11+12+14+16+17+26+28+30+31+37+39+41+42+43+44+45+48+50+52+53+56+57+58+59+60+66
color 0xB300FF, curr_residues
delete curr_residues
select curr_residues, 6xez_Normalized_Atom_SA and chain C and resi 3+6+9+13+18+19+20+31+38+44+46+53+57+58
color 0x8200FF, curr_residues
delete curr_residues
select curr_residues, 6xez_Normalized_Atom_SA and chain C and resi 4+7+8+11+12+15+20+23+24+25+26+29+30+31+32+34+35+41+42+48+49+50+56+57+63+67+69+70+71
color 0xA700FF, curr_residues
delete curr_residues
select curr_residues, 6xez_Normalized_Atom_SA and chain C and resi 4+50+61+73
color 0x0004FF, curr_residues
delete curr_residues
select curr_residues, 6xez_Normalized_Atom_SA and chain C and resi 4+21+43
color 0x00FF7E, curr_residues
delete curr_residues
select curr_residues, 6xez_Normalized_Atom_SA and chain C and resi 4+57+65
color 0x00FF4D, curr_residues
delete curr_residues
select curr_residues, 6xez_Normalized_Atom_SA and chain C and resi 5+26+27+30+34+37+47+52+63+68+70
color 0x5D00FF, curr_residues
delete curr_residues
select curr_residues, 6xez_Normalized_Atom_SA and chain C and resi 5+40+45+66+67+68+72+73
color 0x2C00FF, curr_residues
delete curr_residues
select curr_residues, 6xez_Normalized_Atom_SA and chain C and resi 5+27+38+43+67
color 0x0096FF, curr_residues
delete curr_residues
select curr_residues, 6xez_Normalized_Atom_SA and chain C and resi 5+21+31+70
color 0x9BFF00, curr_residues
delete curr_residues
select curr_residues, 6xez_Normalized_Atom_SA and chain C and resi 6+7+9+12+13+31+38+44+46+47+49+51+54+58+63+71
color 0x8E00FF, curr_residues
delete curr_residues
select curr_residues, 6xez_Normalized_Atom_SA and chain C and resi 7+49
color 0x007EFF, curr_residues
delete curr_residues
select curr_residues, 6xez_Normalized_Atom_SA and chain C and resi 7+41
color 0x00E0FF, curr_residues
delete curr_residues
select curr_residues, 6xez_Normalized_Atom_SA and chain C and resi 8+15+23+49+62
color 0x0066FF, curr_residues
delete curr_residues
select curr_residues, 6xez_Normalized_Atom_SA and chain C and resi 8
color 0xFF0000, curr_residues
delete curr_residues
select curr_residues, 6xez_Normalized_Atom_SA and chain C and resi 9+23
color 0x82FF00, curr_residues
delete curr_residues
select curr_residues, 6xez_Normalized_Atom_SA and chain C and resi 9+21+41+45+61+65
color 0x004DFF, curr_residues
delete curr_residues
select curr_residues, 6xez_Normalized_Atom_SA and chain C and resi 11+14+20+27+31+43+44+53+62+63+66
color 0x7600FF, curr_residues
delete curr_residues
select curr_residues, 6xez_Normalized_Atom_SA and chain C and resi 11+12+26+34
color 0x51FF00, curr_residues
delete curr_residues
select curr_residues, 6xez_Normalized_Atom_SA and chain C and resi 12+19+53
color 0xA7FF00, curr_residues
delete curr_residues
select curr_residues, 6xez_Normalized_Atom_SA and chain C and resi 13+37+60
color 0x0035FF, curr_residues
delete curr_residues
select curr_residues, 6xez_Normalized_Atom_SA and chain C and resi 14+47+60+64
color 0x0010FF, curr_residues
delete curr_residues
select curr_residues, 6xez_Normalized_Atom_SA and chain C and resi 15+18+19+29+41+43+49+62+64
color 0x6A00FF, curr_residues
delete curr_residues
select curr_residues, 6xez_Normalized_Atom_SA and chain C and resi 15
color 0x39FF00, curr_residues
delete curr_residues
select curr_residues, 6xez_Normalized_Atom_SA and chain C and resi 16+24+29
color 0x00BBFF, curr_residues
delete curr_residues
select curr_residues, 6xez_Normalized_Atom_SA and chain C and resi 18+50
color 0x14FF00, curr_residues
delete curr_residues
select curr_residues, 6xez_Normalized_Atom_SA and chain C and resi 19+70+73
color 0x00F8FF, curr_residues
delete curr_residues
select curr_residues, 6xez_Normalized_Atom_SA and chain C and resi 19+20+59
color 0x00ECFF, curr_residues
delete curr_residues
select curr_residues, 6xez_Normalized_Atom_SA and chain C and resi 20+63
color 0x00FF04, curr_residues
delete curr_residues
select curr_residues, 6xez_Normalized_Atom_SA and chain C and resi 21+69+70
color 0x00AFFF, curr_residues
delete curr_residues
select curr_residues, 6xez_Normalized_Atom_SA and chain C and resi 21+35+71
color 0x00FFF8, curr_residues
delete curr_residues
select curr_residues, 6xez_Normalized_Atom_SA and chain C and resi 21+22+30+40+70+73
color 0x5100FF, curr_residues
delete curr_residues
select curr_residues, 6xez_Normalized_Atom_SA and chain C and resi 23+35+46+51+71
color 0x0059FF, curr_residues
delete curr_residues
select curr_residues, 6xez_Normalized_Atom_SA and chain C and resi 24+29+60+62+63+66
color 0x00C7FF, curr_residues
delete curr_residues
select curr_residues, 6xez_Normalized_Atom_SA and chain C and resi 24+67
color 0xF0FF00, curr_residues
delete curr_residues
select curr_residues, 6xez_Normalized_Atom_SA and chain C and resi 25+26+34+47+65+69
color 0x1400FF, curr_residues
delete curr_residues
select curr_residues, 6xez_Normalized_Atom_SA and chain C and resi 26+70
color 0x00FF59, curr_residues
delete curr_residues
select curr_residues, 6xez_Normalized_Atom_SA and chain C and resi 27+54+69
color 0x00FF1C, curr_residues
delete curr_residues
select curr_residues, 6xez_Normalized_Atom_SA and chain C and resi 27
color 0xFFAB00, curr_residues
delete curr_residues
select curr_residues, 6xez_Normalized_Atom_SA and chain C and resi 28+36+58
color 0x00FF8A, curr_residues
delete curr_residues
select curr_residues, 6xez_Normalized_Atom_SA and chain C and resi 29+37+43+47
color 0x00FFC7, curr_residues
delete curr_residues
select curr_residues, 6xez_Normalized_Atom_SA and chain C and resi 30
color 0x45FF00, curr_residues
delete curr_residues
select curr_residues, 6xez_Normalized_Atom_SA and chain C and resi 31+52
color 0x00FFEC, curr_residues
delete curr_residues
select curr_residues, 6xez_Normalized_Atom_SA and chain C and resi 34
color 0x00FFBB, curr_residues
delete curr_residues
select curr_residues, 6xez_Normalized_Atom_SA and chain C and resi 34+68
color 0x001CFF, curr_residues
delete curr_residues
select curr_residues, 6xez_Normalized_Atom_SA and chain C and resi 37+40
color 0x00FF10, curr_residues
delete curr_residues
select curr_residues, 6xez_Normalized_Atom_SA and chain C and resi 40
color 0x0028FF, curr_residues
delete curr_residues
select curr_residues, 6xez_Normalized_Atom_SA and chain C and resi 41
color 0xFF8600, curr_residues
delete curr_residues
select curr_residues, 6xez_Normalized_Atom_SA and chain C and resi 41
color 0xCBFF00, curr_residues
delete curr_residues
select curr_residues, 6xez_Normalized_Atom_SA and chain C and resi 43+72
color 0x6AFF00, curr_residues
delete curr_residues
select curr_residues, 6xez_Normalized_Atom_SA and chain C and resi 43
color 0xFCFF00, curr_residues
delete curr_residues
select curr_residues, 6xez_Normalized_Atom_SA and chain C and resi 46
color 0xFFF400, curr_residues
delete curr_residues
select curr_residues, 6xez_Normalized_Atom_SA and chain C and resi 49+50+67+71
color 0x2000FF, curr_residues
delete curr_residues
select curr_residues, 6xez_Normalized_Atom_SA and chain C and resi 49+61
color 0x0096FF, curr_residues
delete curr_residues
select curr_residues, 6xez_Normalized_Atom_SA and chain C and resi 50
color 0xFFDC00, curr_residues
delete curr_residues
select curr_residues, 6xez_Normalized_Atom_SA and chain C and resi 51+57
color 0x0072FF, curr_residues
delete curr_residues
select curr_residues, 6xez_Normalized_Atom_SA and chain C and resi 53
color 0xBFFF00, curr_residues
delete curr_residues
select curr_residues, 6xez_Normalized_Atom_SA and chain C and resi 56
color 0xFFB700, curr_residues
delete curr_residues
select curr_residues, 6xez_Normalized_Atom_SA and chain C and resi 60+73
color 0x76FF00, curr_residues
delete curr_residues
select curr_residues, 6xez_Normalized_Atom_SA and chain C and resi 63+71
color 0x2CFF00, curr_residues
delete curr_residues
select curr_residues, 6xez_Normalized_Atom_SA and chain C and resi 64
color 0x00FF41, curr_residues
delete curr_residues
select curr_residues, 6xez_Normalized_Atom_SA and chain C and resi 69
color 0xFF9F00, curr_residues
delete curr_residues
select curr_residues, 6xez_Normalized_Atom_SA and chain C and resi 72
color 0x00FFA3, curr_residues
delete curr_residues
select curr_residues, 6xez_Normalized_Atom_SA and chain C and resi 73
color 0x8EFF00, curr_residues
delete curr_residues
select curr_residues, 6xez_Normalized_Atom_SA and chain C and resi 73
color 0x00FF10, curr_residues
delete curr_residues
save /media/daniel/ExtraDrive1/Results/Covid19/Final_Run/coronavirus/COV2_ORF1ab_breakdown/nsp7/structure/6xez_Normalized_Atom_SA.pse, 6xez_Normalized_Atom_SA, -1, pse
load /Users/dmkonecki/Documents/WorkStationSync/Results/Covid19/Final_Run/DataSets_09142020_full/Shared/PDBs/6xez.pdb, 6xez_Linear_Epitopes
select target_chain, 6xez_Linear_Epitopes and chain C
color white, 6xez_Linear_Epitopes
delete target_chain
select curr_residues, 6xez_Linear_Epitopes and chain C and resi 36+37
color 0xFF2400, curr_residues
delete curr_residues
save /media/daniel/ExtraDrive1/Results/Covid19/Final_Run/coronavirus/COV2_ORF1ab_breakdown/nsp7/structure/6xez_Linear_Epitopes.pse, 6xez_Linear_Epitopes, -1, pse
load /Users/dmkonecki/Documents/WorkStationSync/Results/Covid19/Final_Run/DataSets_09142020_full/Shared/PDBs/6xez.pdb, 6xez_Structural_Epitopes_3A
select target_chain, 6xez_Structural_Epitopes_3A and chain C
color white, 6xez_Structural_Epitopes_3A
delete target_chain
save /media/daniel/ExtraDrive1/Results/Covid19/Final_Run/coronavirus/COV2_ORF1ab_breakdown/nsp7/structure/6xez_Structural_Epitopes_3A.pse, 6xez_Structural_Epitopes_3A, -1, pse
load /Users/dmkonecki/Documents/WorkStationSync/Results/Covid19/Final_Run/DataSets_09142020_full/Shared/PDBs/6xez.pdb, 6xez_Structural_Epitopes_4A
select target_chain, 6xez_Structural_Epitopes_4A and chain C
color white, 6xez_Structural_Epitopes_4A
delete target_chain
select curr_residues, 6xez_Structural_Epitopes_4A and chain C and resi 8
color 0xFFDC00, curr_residues
delete curr_residues
select curr_residues, 6xez_Structural_Epitopes_4A and chain C and resi 11
color 0xFF4900, curr_residues
delete curr_residues
save /media/daniel/ExtraDrive1/Results/Covid19/Final_Run/coronavirus/COV2_ORF1ab_breakdown/nsp7/structure/6xez_Structural_Epitopes_4A.pse, 6xez_Structural_Epitopes_4A, -1, pse
load /Users/dmkonecki/Documents/WorkStationSync/Results/Covid19/Final_Run/DataSets_09142020_full/Shared/PDBs/6xez.pdb, 6xez_Structural_Epitopes_5A
select target_chain, 6xez_Structural_Epitopes_5A and chain C
color white, 6xez_Structural_Epitopes_5A
delete target_chain
select curr_residues, 6xez_Structural_Epitopes_5A and chain C and resi 8
color 0xFFDC00, curr_residues
delete curr_residues
select curr_residues, 6xez_Structural_Epitopes_5A and chain C and resi 11
color 0xFF4900, curr_residues
delete curr_residues
select curr_residues, 6xez_Structural_Epitopes_5A and chain C and resi 36+37
color 0xFF2400, curr_residues
delete curr_residues
save /media/daniel/ExtraDrive1/Results/Covid19/Final_Run/coronavirus/COV2_ORF1ab_breakdown/nsp7/structure/6xez_Structural_Epitopes_5A.pse, 6xez_Structural_Epitopes_5A, -1, pse
load /Users/dmkonecki/Documents/WorkStationSync/Results/Covid19/Final_Run/DataSets_09142020_full/Shared/PDBs/6xez.pdb, 6xez_Structural_Epitopes_6A
select target_chain, 6xez_Structural_Epitopes_6A and chain C
color white, 6xez_Structural_Epitopes_6A
delete target_chain
select curr_residues, 6xez_Structural_Epitopes_6A and chain C and resi 8
color 0xFFDC00, curr_residues
delete curr_residues
select curr_residues, 6xez_Structural_Epitopes_6A and chain C and resi 11
color 0xFF4900, curr_residues
delete curr_residues
select curr_residues, 6xez_Structural_Epitopes_6A and chain C and resi 36+37
color 0xFF2400, curr_residues
delete curr_residues
save /media/daniel/ExtraDrive1/Results/Covid19/Final_Run/coronavirus/COV2_ORF1ab_breakdown/nsp7/structure/6xez_Structural_Epitopes_6A.pse, 6xez_Structural_Epitopes_6A, -1, pse
load /Users/dmkonecki/Documents/WorkStationSync/Results/Covid19/Final_Run/DataSets_09142020_full/Shared/PDBs/6xez.pdb, 6xez_Structural_Epitopes_7A
select target_chain, 6xez_Structural_Epitopes_7A and chain C
color white, 6xez_Structural_Epitopes_7A
delete target_chain
select curr_residues, 6xez_Structural_Epitopes_7A and chain C and resi 8
color 0xFFDC00, curr_residues
delete curr_residues
select curr_residues, 6xez_Structural_Epitopes_7A and chain C and resi 11
color 0xFF4900, curr_residues
delete curr_residues
select curr_residues, 6xez_Structural_Epitopes_7A and chain C and resi 36+37
color 0xFF2400, curr_residues
delete curr_residues
save /media/daniel/ExtraDrive1/Results/Covid19/Final_Run/coronavirus/COV2_ORF1ab_breakdown/nsp7/structure/6xez_Structural_Epitopes_7A.pse, 6xez_Structural_Epitopes_7A, -1, pse
load /Users/dmkonecki/Documents/WorkStationSync/Results/Covid19/Final_Run/DataSets_09142020_full/Shared/PDBs/6xez.pdb, 6xez_Structural_Epitopes_7.5A
select target_chain, 6xez_Structural_Epitopes_7.5A and chain C
color white, 6xez_Structural_Epitopes_7.5A
delete target_chain
select curr_residues, 6xez_Structural_Epitopes_7.5A and chain C and resi 8
color 0xFFDC00, curr_residues
delete curr_residues
select curr_residues, 6xez_Structural_Epitopes_7.5A and chain C and resi 11
color 0xFF4900, curr_residues
delete curr_residues
select curr_residues, 6xez_Structural_Epitopes_7.5A and chain C and resi 29
color 0xFF7A00, curr_residues
delete curr_residues
select curr_residues, 6xez_Structural_Epitopes_7.5A and chain C and resi 36+37
color 0xFF2400, curr_residues
delete curr_residues
save /media/daniel/ExtraDrive1/Results/Covid19/Final_Run/coronavirus/COV2_ORF1ab_breakdown/nsp7/structure/6xez_Structural_Epitopes_7.5A.pse, 6xez_Structural_Epitopes_7.5A, -1, pse
load /Users/dmkonecki/Documents/WorkStationSync/Results/Covid19/Final_Run/DataSets_09142020_full/Shared/PDBs/6xez.pdb, 6xez_Structural_Epitopes_8A
select target_chain, 6xez_Structural_Epitopes_8A and chain C
color white, 6xez_Structural_Epitopes_8A
delete target_chain
select curr_residues, 6xez_Structural_Epitopes_8A and chain C and resi 8
color 0xFFDC00, curr_residues
delete curr_residues
select curr_residues, 6xez_Structural_Epitopes_8A and chain C and resi 11
color 0xFF4900, curr_residues
delete curr_residues
select curr_residues, 6xez_Structural_Epitopes_8A and chain C and resi 29
color 0xFF7A00, curr_residues
delete curr_residues
select curr_residues, 6xez_Structural_Epitopes_8A and chain C and resi 36+37
color 0xFF2400, curr_residues
delete curr_residues
save /media/daniel/ExtraDrive1/Results/Covid19/Final_Run/coronavirus/COV2_ORF1ab_breakdown/nsp7/structure/6xez_Structural_Epitopes_8A.pse, 6xez_Structural_Epitopes_8A, -1, pse
set grid_mode, 1
save /media/daniel/ExtraDrive1/Results/Covid19/Final_Run/coronavirus/COV2_ORF1ab_breakdown/nsp7/structure/6xez_combined.pse, 6xez_Normalized_Unique_Var_Count or 6xez_Normalized_Var_Count or 6xez_Normalized_Highest_Freq_Var_Count or 6xez_Inverse_ET or 6xez_Rescaled_EA_Highest_Freq or 6xez_Normalized_Atom_SA or 6xez_Linear_Epitopes or 6xez_Structural_Epitopes_3A or 6xez_Structural_Epitopes_4A or 6xez_Structural_Epitopes_5A or 6xez_Structural_Epitopes_6A or 6xez_Structural_Epitopes_7A or 6xez_Structural_Epitopes_7.5A or 6xez_Structural_Epitopes_8A, -1, pse
delete all