Comparing distributions of experimental and random diffusion values (p-values for KS tests) Seeds Recipients Randomize Seeds (degree-matched) Randomize Recipients (degree-matched) Randomize Seeds (uniform) Randomize Recipients (uniform) 49_exp19 Ismael_GS 5.44e-01 4.28e-01 8.34e-01 6.82e-02 Ismael_GS 49_exp19 5.68e-01 4.30e-01 4.08e-04 1.14e-01 Evaluating how well 49_exp19 genes are linked to Ismael_GS genes, comparing against random ROC results Seeds Recipients AUROC Z-score for Random Seeds (degree-matched) Z-score for Random Recipients (degree-matched) Z-score for Random Seeds (uniform) Z-score for Random Recipients (uniform) 49_exp19 Ismael_GS 0.64 -0.11 -0.20 0.01 1.85 Ismael_GS 49_exp19 0.56 2.35 1.37 0.95 1.28 PRC results Seeds Recipients AUPRC Z-score for Random Seeds (degree-matched) Z-score for Random Recipients (degree-matched) Z-score for Random Seeds (uniform) Z-score for Random Recipients (uniform) 49_exp19 Ismael_GS 0.00 -0.35 -0.27 -0.40 0.11 Ismael_GS 49_exp19 0.00 0.15 0.15 -0.11 -0.16 Z-scores are computed for the experimental area under ROC or PRC based on distributions of the random areas under these curves Seeds: Genes where diffusion signal starts FROM) Recipients: Genes that receive the diffusion signal and that are in the other validated group Random genes are selected either uniformly or degree matched Number of genes ** #Total # Mapped in the network Not mapped genes 49_exp19 49 49 Ismael_GS 14 14